Index A | B | C | D | E | F | G | H | I | J | L | M | N | O | P | R | S | T | U | V | W | Z A add_jitter() (Covariance method) AffineMap (class in goal.geometry.manifold.linear) amb_man (ComposedEmbedding property) (Embedding property) (GeneralizedGaussianLocationEmbedding property) (IdentityEmbedding property) (LatentHarmoniumEmbedding property) (NormalCovarianceEmbedding property) (ObservableEmbedding property) (PopulationLocationEmbedding property) Analytic (class in goal.geometry.exponential_family.base) analytic_hmog() (in module goal.models.graphical.hmog) AnalyticConjugated (class in goal.geometry.exponential_family.harmonium) AnalyticHMoG (class in goal.models.graphical.hmog) AnalyticMixture (class in goal.models.harmonium.mixture) AnalyticProduct (class in goal.geometry.exponential_family.combinators) append_embedding() (LinearMap method) approximate_mean_variance() (CoMPoisson method) average_log_density() (Differentiable method) average_log_observable_density() (DifferentiableConjugated method) average_sufficient_statistic() (ExponentialFamily method) B BoltzmannLGM (class in goal.models.harmonium.lgm) C Categorical (class in goal.models.base.categorical) check_natural_parameters() (CoMPoisson method) (Covariance method) (ExponentialFamily method) (Normal method) cholesky_matvec() (Diagonal class method) (Identity class method) (PositiveDefinite class method) cholesky_whiten() (Diagonal class method) (Identity class method) (PositiveDefinite class method) cmp_man (Mixture property) cod_man (LinearMap property) com_poisson_mixture() (in module goal.models.harmonium.poisson) CompleteMixture (class in goal.models.harmonium.mixture) CoMPoisson (class in goal.models.base.poisson) CoMPoissonPopulation (class in goal.models.harmonium.poisson) ComposedEmbedding (class in goal.geometry.manifold.embedding) CoMShape (class in goal.models.base.poisson) Conjugated (class in goal.geometry.exponential_family.harmonium) conjugation_parameters() (Conjugated method) (LGM method) (Mixture method) contrastive_divergence_step() (Harmonium method) cov_man (Normal property) Covariance (class in goal.models.base.gaussian.normal) D data_dim (Categorical property) (CoMShape property) (Covariance property) (Euclidean property) (ExponentialFamily property) (Harmonium property) (LocationShape property) (Poisson property) (Product property) (VonMises property) density() (Differentiable method) Diagonal (class in goal.geometry.manifold.matrix) Differentiable (class in goal.geometry.exponential_family.base) differentiable_hmog() (in module goal.models.graphical.hmog) DifferentiableConjugated (class in goal.geometry.exponential_family.harmonium) DifferentiableHMoG (class in goal.models.graphical.hmog) DifferentiableProduct (class in goal.geometry.exponential_family.combinators) dim (Categorical property) (CoMShape property) (Euclidean property) (Manifold property) (Null property) (Pair property) (Poisson property) (Replicated property) (Triple property) (VonMises property) dom_man (AffineMap attribute) (LinearMap property) E embed() (ComposedEmbedding method) (Embedding method) (GeneralizedGaussianLocationEmbedding method) (IdentityEmbedding method) (LatentHarmoniumEmbedding method) (NormalCovarianceEmbedding method) (TupleEmbedding method) embed_in_super() (Diagonal class method) (Identity class method) (MatrixRep class method) (PositiveDefinite class method) (Rectangular class method) (Scale class method) (Square class method) (Symmetric class method) embed_params() (MatrixRep class method) embed_rep() (Normal method) Embedding (class in goal.geometry.manifold.embedding) Euclidean (class in goal.models.base.gaussian.normal) expectation_maximization() (AnalyticConjugated method) (AnalyticHMoG method) (FactorAnalysis method) (PrincipalComponentAnalysis method) ExponentialFamily (class in goal.geometry.exponential_family.base) extract_likelihood_input() (Conjugated method) F FactorAnalysis (class in goal.models.harmonium.lgm) from_loadings() (FactorAnalysis method) from_matrix() (Diagonal class method) (Identity class method) (MatrixRep class method) (Rectangular class method) (Scale class method) (Symmetric class method) from_probs() (Categorical method) fst_man (AffineMap property) (CoMPoisson property) (CoMPoissonPopulation property) (Harmonium property) (Normal property) (Pair property) (Triple property) G gau_man (GeneralizedGaussianLocationEmbedding attribute) GeneralizedGaussianLocationEmbedding (class in goal.models.harmonium.lgm) Generative (class in goal.geometry.exponential_family.base) GenerativeProduct (class in goal.geometry.exponential_family.combinators) get_diagonal() (Diagonal class method) (Identity class method) (MatrixRep class method) (Scale class method) (Symmetric class method) get_replicate() (Replicated method) gibbs_step() (Generative method) (Harmonium method) goal.models.base.gaussian.normal.DiagonalCovariance (in module goal.models.base.gaussian.normal) goal.models.base.gaussian.normal.DiagonalNormal (in module goal.models.base.gaussian.normal) goal.models.base.gaussian.normal.FullCovariance (in module goal.models.base.gaussian.normal) goal.models.base.gaussian.normal.FullNormal (in module goal.models.base.gaussian.normal) goal.models.base.gaussian.normal.IsotropicCovariance (in module goal.models.base.gaussian.normal) goal.models.base.gaussian.normal.IsotropicNormal (in module goal.models.base.gaussian.normal) goal.models.base.gaussian.normal.StandardNormal (in module goal.models.base.gaussian.normal) H Harmonium (class in goal.geometry.exponential_family.harmonium) hrm_man (ObservableEmbedding attribute) I Identity (class in goal.geometry.manifold.matrix) IdentityEmbedding (class in goal.geometry.manifold.embedding) initialize() (CoMPoisson method) (Covariance method) (ExponentialFamily method) (Harmonium method) (LocationShape method) (Normal method) (Product method) initialize_from_sample() (Analytic method) (AnalyticProduct method) (CoMPoisson method) (ExponentialFamily method) (Harmonium method) (Normal method) (Poisson method) (Product method) int_man (Harmonium property) (LGM property) (Mixture property) int_obs_emb (LGM property) int_pst_emb (LGM property) inverse() (Diagonal class method) (Identity class method) (PositiveDefinite class method) (Square class method) (SquareMap method) is_positive_definite() (Diagonal class method) (Identity class method) (PositiveDefinite class method) (Scale class method) (Square class method) (SquareMap method) J join_conjugated() (SymmetricConjugated method) join_coords() (CoMPoissonPopulation method) (Pair method) (Triple method) (Tuple method) join_location_precision() (Normal method) join_mean_concentration() (VonMises method) join_mean_covariance() (Normal method) join_mean_mixture() (Mixture method) join_mean_second_moment() (Normal method) join_mode_dispersion() (CoMPoisson method) join_natural_mixture() (CompleteMixture method) L lat_dim (BoltzmannLGM attribute) (NormalLGM attribute) lat_man (BoltzmannLGM property) (Mixture property) (NormalAnalyticLGM property) (SymmetricConjugated property) LatentHarmoniumEmbedding (class in goal.geometry.exponential_family.graphical) LGM (class in goal.models.harmonium.lgm) likelihood_at() (Harmonium method) likelihood_function() (Harmonium method) LinearComposedEmbedding (class in goal.geometry.manifold.embedding) LinearEmbedding (class in goal.geometry.manifold.embedding) LinearMap (class in goal.geometry.manifold.linear) lkl_fun_man (Harmonium property) loc_man (Normal property) LocationShape (class in goal.geometry.exponential_family.combinators) log_base_measure() (Categorical method) (CoMPoisson method) (CoMShape method) (Covariance method) (Euclidean method) (ExponentialFamily method) (Harmonium method) (LocationShape method) (Normal method) (Poisson method) (Product method) (VonMises method) log_density() (Differentiable method) log_observable_density() (DifferentiableConjugated method) log_partition_function() (Categorical method) (CoMPoisson method) (Differentiable method) (DifferentiableConjugated method) (DifferentiableProduct method) (Euclidean method) (Normal method) (Poisson method) (VonMises method) logdet() (Diagonal class method) (Identity class method) (PositiveDefinite class method) (Scale class method) (Square class method) (SquareMap method) M man (IdentityEmbedding attribute) Manifold (class in goal.geometry.manifold.base) map() (Replicated method) map_codomain_embedding() (LinearMap method) map_diagonal() (Diagonal class method) (MatrixRep class method) (Rectangular class method) (Scale class method) (Symmetric class method) map_domain_embedding() (LinearMap method) map_man (AffineMap attribute) matmat() (MatrixRep class method) MatrixRep (class in goal.geometry.manifold.matrix) matvec() (Diagonal class method) (Identity class method) (MatrixRep class method) (Rectangular class method) (Scale class method) mean_contrastive_divergence_gradient() (Harmonium method) mean_posterior_statistics() (DifferentiableConjugated method) mid_emb (ComposedEmbedding attribute) (LinearComposedEmbedding attribute) mid_man (ComposedEmbedding property) Mixture (class in goal.models.harmonium.mixture) N n_categories (Categorical attribute) (Mixture attribute) n_neurons (PopulationLocationEmbedding attribute) n_reps (Replicated attribute) negative_entropy() (Analytic method) (AnalyticConjugated method) (AnalyticProduct method) (Categorical method) (Normal method) (Poisson method) Normal (class in goal.models.base.gaussian.normal) NormalAnalyticLGM (class in goal.models.harmonium.lgm) NormalCovarianceEmbedding (class in goal.models.harmonium.lgm) NormalLGM (class in goal.models.harmonium.lgm) Null (class in goal.geometry.manifold.combinators) num_params() (Diagonal class method) (Identity class method) (MatrixRep class method) (Rectangular class method) (Scale class method) (Symmetric class method) numerical_mean_variance() (CoMPoisson method) O obs_dim (LGM attribute) obs_emb (Mixture attribute) obs_man (Harmonium property) (LGM property) obs_rep (LGM attribute) observable_density() (DifferentiableConjugated method) observable_distribution() (NormalLGM method) observable_mean_covariance() (Mixture method) observable_sample() (Conjugated method) ObservableEmbedding (class in goal.geometry.exponential_family.graphical) outer_product() (Diagonal class method) (Identity class method) (LinearMap method) (MatrixRep class method) (Rectangular class method) (Scale class method) P Pair (class in goal.geometry.manifold.combinators) Poisson (class in goal.models.base.poisson) poisson_mixture() (in module goal.models.harmonium.poisson) PopulationLocationEmbedding (class in goal.models.harmonium.poisson) PositiveDefinite (class in goal.geometry.manifold.matrix) posterior_assignments() (AnalyticHMoG method) (SymmetricHMoG method) posterior_at() (Harmonium method) posterior_categorical() (AnalyticHMoG method) (DifferentiableHMoG method) (SymmetricHMoG method) posterior_function() (Harmonium method) posterior_hard_assignment() (DifferentiableHMoG method) posterior_soft_assignments() (DifferentiableHMoG method) posterior_statistics() (DifferentiableConjugated method) prepend_embedding() (LinearMap method) PrincipalComponentAnalysis (class in goal.models.harmonium.lgm) prior() (Conjugated method) Product (class in goal.geometry.exponential_family.combinators) project() (GeneralizedGaussianLocationEmbedding method) (IdentityEmbedding method) (LatentHarmoniumEmbedding method) (LinearComposedEmbedding method) (LinearEmbedding method) (NormalCovarianceEmbedding method) (TupleEmbedding method) project_from_super() (Diagonal class method) (Identity class method) (MatrixRep class method) (PositiveDefinite class method) (Rectangular class method) (Scale class method) (Square class method) (Symmetric class method) project_params() (MatrixRep class method) project_rep() (Normal method) prr_hrm (LatentHarmoniumEmbedding attribute) prr_man (Conjugated property) (SymmetricConjugated property) pst_fun_man (Harmonium property) pst_hrm (LatentHarmoniumEmbedding attribute) pst_man (BoltzmannLGM property) (Harmonium property) (NormalLGM property) (SymmetricConjugated property) pst_obs_emb (LatentHarmoniumEmbedding attribute) pst_prr_emb (BoltzmannLGM property) (Conjugated property) (NormalAnalyticLGM property) (NormalLGM property) (SymmetricConjugated property) pst_rep (NormalLGM attribute) pullback() (ComposedEmbedding method) (Embedding method) (LinearEmbedding method) R Rectangular (class in goal.geometry.manifold.matrix) regularize_covariance() (Normal method) relative_entropy() (Differentiable method) relative_whiten() (Normal method) rep (Covariance attribute) (Normal attribute) (SquareMap attribute) rep_man (Replicated attribute) Replicated (class in goal.geometry.manifold.combinators) S sample() (Categorical method) (CoMPoisson method) (Conjugated method) (Euclidean method) (Generative method) (GenerativeProduct method) (Normal method) (Poisson method) (VonMises method) Scale (class in goal.geometry.manifold.matrix) shp_man (Normal property) snd_man (AffineMap property) (CoMPoisson property) (CoMPoissonPopulation property) (Harmonium property) (Normal property) (Pair property) (Triple property) split_conjugated() (Conjugated method) split_coords() (CoMPoissonPopulation method) (Pair method) (Triple method) (Tuple method) split_location_precision() (Normal method) split_mean_concentration() (VonMises method) split_mean_covariance() (Normal method) split_mean_mixture() (CompleteMixture method) split_mean_second_moment() (Normal method) split_mode_dispersion() (CoMPoisson method) split_natural_mixture() (Mixture method) Square (class in goal.geometry.manifold.matrix) SquareMap (class in goal.geometry.manifold.linear) standard_normal() (Normal method) statistical_covariance() (CoMPoisson method) (Normal method) (Poisson method) (Product method) (StatisticalMoments method) statistical_mean() (CoMPoisson method) (Normal method) (Poisson method) (Product method) (StatisticalMoments method) StatisticalMoments (class in goal.geometry.exponential_family.protocols) stochastic_to_mean() (Generative method) sub_emb (ComposedEmbedding attribute) (LinearComposedEmbedding attribute) sub_man (ComposedEmbedding property) (Embedding property) (GeneralizedGaussianLocationEmbedding property) (IdentityEmbedding property) (LatentHarmoniumEmbedding property) (NormalCovarianceEmbedding property) (ObservableEmbedding property) (PopulationLocationEmbedding property) sufficient_statistic() (Categorical method) (CoMShape method) (Covariance method) (Euclidean method) (ExponentialFamily method) (Harmonium method) (LocationShape method) (Normal method) (Poisson method) (Product method) (VonMises method) Symmetric (class in goal.geometry.manifold.matrix) symmetric_hmog() (in module goal.models.graphical.hmog) SymmetricConjugated (class in goal.geometry.exponential_family.harmonium) SymmetricHMoG (class in goal.models.graphical.hmog) T to_1d() (Replicated method) to_2d() (Replicated method) to_matrix() (Diagonal class method) (Identity class method) (MatrixRep class method) (Rectangular class method) (Scale class method) (Symmetric class method) to_mean() (Differentiable method) to_natural() (Analytic method) (AnalyticConjugated method) to_natural_likelihood() (AnalyticConjugated method) (AnalyticMixture method) (NormalAnalyticLGM method) to_normal() (NormalLGM method) to_probs() (Categorical method) translate() (GeneralizedGaussianLocationEmbedding method) (IdentityEmbedding method) (LinearComposedEmbedding method) (LinearEmbedding method) (NormalCovarianceEmbedding method) (TupleEmbedding method) transpose() (Diagonal class method) (LinearMap method) (MatrixRep class method) (Rectangular class method) (Symmetric class method) transpose_apply() (LinearMap method) trd_man (Harmonium property) (Triple property) Triple (class in goal.geometry.manifold.combinators) trn_man (LinearMap property) tup_idx (ObservableEmbedding property) (PopulationLocationEmbedding property) (TupleEmbedding property) Tuple (class in goal.geometry.manifold.combinators) TupleEmbedding (class in goal.geometry.manifold.embedding) U uniform_initialize() (Manifold method) V VonMises (class in goal.models.base.von_mises) W whiten_prior() (AnalyticHMoG method) (DifferentiableHMoG method) (NormalLGM method) window_size (CoMPoisson attribute) Z zeros() (Manifold method)